Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-fructofuranosidase | SAMN04487898_11083 | Not Available | Positive | 3752991 - 3754550 | 57116.6 |
| fructan beta-fructosidase | SAMN04487898_11084 | Not Available | Positive | 3754580 - 3756106 | 56633.4 |
| hypothetical protein | SAMN04487898_11085 | Not Available | Positive | 3756252 - 3757682 | 50188.8 |
| hypothetical protein | SAMN04487898_11086 | Not Available | Positive | 3757754 - 3758098 | 12212.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11087 | Not Available | Positive | 3758332 - 3758931 | 22924.7 |
| fecr family protein | SAMN04487898_11088 | Not Available | Positive | 3759027 - 3760208 | 43504.5 |
| disulphide bond corrector protein dsbc | SAMN04487898_11089 | Not Available | Positive | 3760218 - 3760739 | 19330.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11090 | Not Available | Positive | 3760858 - 3764484 | 133520.0 |
| susd family protein | SAMN04487898_11091 | Not Available | Positive | 3764506 - 3765993 | 56285.2 |
| peroxiredoxin | SAMN04487898_11092 | Not Available | Positive | 3766059 - 3767144 | 40018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

