Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right handed beta helix region | SAMN04487898_101269 | Not Available | Positive | 386726 - 389059 | 87944.4 |
| uncharacterized membrane protein | SAMN04487898_101270 | Not Available | Negative | 389060 - 389419 | 13211.2 |
| thioredoxin reductase | SAMN04487898_101271 | Not Available | Positive | 389572 - 390477 | 32457.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_101272 | Not Available | Positive | 390604 - 391203 | 23522.4 |
| fecr family protein | SAMN04487898_101273 | Not Available | Positive | 391270 - 392448 | 43878.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101274 | Not Available | Positive | 392631 - 396227 | 134653.0 |
| susd family protein | SAMN04487898_101275 | Not Available | Positive | 396245 - 397657 | 52392.4 |
| thioredoxin | SAMN04487898_101276 | Not Available | Positive | 397683 - 398867 | 45094.3 |
| peptidase family m3 | SAMN04487898_101277 | Not Available | Positive | 398904 - 400097 | 45575.6 |
| transcriptional regulator, iclr family | SAMN04487898_101278 | Not Available | Negative | 400218 - 400997 | 28626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

