Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11073 | Not Available | Positive | 3736867 - 3737451 | 22617.6 |
| fecr family protein | SAMN04487898_11074 | Not Available | Positive | 3737565 - 3738728 | 43664.5 |
| hypothetical protein | SAMN04487898_11075 | Not Available | Positive | 3738863 - 3739933 | 39175.9 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN04487898_11076 | Not Available | Positive | 3739978 - 3741318 | 51293.4 |
| abc-type sugar transport system, substrate-binding protein, contains n-terminal xre family hth domain | SAMN04487898_11077 | Not Available | Negative | 3741367 - 3743985 | 98139.2 |
| mfs transporter, sugar porter (sp) family | SAMN04487898_11078 | Not Available | Positive | 3744456 - 3745790 | 49190.8 |
| fructokinase | SAMN04487898_11079 | Not Available | Positive | 3745801 - 3746721 | 34606.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11080 | Not Available | Positive | 3746762 - 3749839 | 112915.0 |
| starch-binding associating with outer membrane | SAMN04487898_11081 | Not Available | Positive | 3749853 - 3751553 | 64368.2 |
| protein of unknown function | SAMN04487898_11082 | Not Available | Positive | 3751577 - 3752959 | 49567.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

