Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11033 | Not Available | Negative | 3670266 - 3671237 | 37288.6 |
| hypothetical protein | SAMN04487898_11034 | Not Available | Negative | 3671399 - 3671563 | 6403.63 |
| transposase, is4 family | SAMN04487898_11035 | Not Available | Negative | 3671515 - 3673050 | 59030.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487898_11036 | Not Available | Negative | 3673222 - 3673977 | 26931.1 |
| arac-type dna-binding protein | SAMN04487898_11037 | Not Available | Negative | 3674032 - 3674430 | 14968.5 |
| hypothetical protein | SAMN04487898_11038 | Not Available | Positive | 3674741 - 3676675 | 73679.3 |
| unsaturated chondroitin disaccharide hydrolase | SAMN04487898_11039 | Not Available | Positive | 3676769 - 3677986 | 45983.1 |
| alpha-glucosidase | SAMN04487898_11040 | Not Available | Positive | 3678042 - 3679943 | 72430.7 |
| mfs transporter, fhs family, l-fucose permease | SAMN04487898_11041 | Not Available | Positive | 3679977 - 3681218 | 44998.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487898_11042 | Not Available | Positive | 3681219 - 3683141 | 71448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

