Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_11013 | Not Available | Negative | 3641870 - 3643486 | 60688.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11014 | Not Available | Negative | 3643511 - 3646696 | 115814.0 |
| ligand-binding sensor domain-containing protein | SAMN04487898_11015 | Not Available | Positive | 3646980 - 3651005 | 152059.0 |
| hypothetical protein | SAMN04487898_11016 | Not Available | Negative | 3651114 - 3651311 | 7615.33 |
| signal transduction histidine kinase | SAMN04487898_11017 | Not Available | Negative | 3651325 - 3652911 | 58389.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487898_11018 | Not Available | Negative | 3652945 - 3654165 | 45158.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11019 | Not Available | Positive | 3654579 - 3658175 | 131665.0 |
| susd family protein | SAMN04487898_11020 | Not Available | Positive | 3658186 - 3659589 | 52512.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_11021 | Not Available | Positive | 3659612 - 3661597 | 74937.9 |
| hypothetical protein | SAMN04487898_11022 | Not Available | Positive | 3661597 - 3662673 | 39230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

