Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_1103 | Not Available | Positive | 3630554 - 3631033 | 16581.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_1104 | Not Available | Positive | 3631065 - 3632363 | 47179.3 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_1105 | Not Available | Positive | 3632435 - 3633403 | 36060.0 |
| outer membrane protein ompa | SAMN04487898_1106 | Not Available | Positive | 3633457 - 3635418 | 73765.6 |
| hypothetical protein | SAMN04487898_1107 | Not Available | Positive | 3635481 - 3635735 | 9643.65 |
| hypothetical protein | SAMN04487898_1108 | Not Available | Negative | 3635818 - 3636033 | 8195.52 |
| heparinase ii/iii-like protein | SAMN04487898_1109 | Not Available | Negative | 3636168 - 3638039 | 69594.5 |
| glycosyl hydrolase family 88 | SAMN04487898_11010 | Not Available | Negative | 3638072 - 3639337 | 47721.1 |
| arabinogalactan endo-1,4-beta-galactosidase | SAMN04487898_11011 | Not Available | Negative | 3639357 - 3640883 | 55969.9 |
| protein of unknown function | SAMN04487898_11012 | Not Available | Negative | 3640895 - 3641851 | 34460.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

