Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_109220 | Not Available | Negative | 3619418 - 3620617 | 44820.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_109221 | Not Available | Negative | 3620838 - 3621428 | 22892.9 |
| transcriptional regulator, tetr family | SAMN04487898_109222 | Not Available | Positive | 3621930 - 3622520 | 21731.4 |
| uncharacterized oxidoreductase | SAMN04487898_109223 | Not Available | Positive | 3622649 - 3623368 | 25688.4 |
| alcohol dehydrogenase | SAMN04487898_109224 | Not Available | Positive | 3623420 - 3624427 | 36728.0 |
| hypothetical protein | SAMN04487898_109225 | Not Available | Negative | 3624489 - 3624629 | 5213.46 |
| transposase | SAMN04487898_109226 | Not Available | Negative | 3624622 - 3625254 | 24659.6 |
| hypothetical protein | SAMN04487898_109227 | Not Available | Negative | 3625586 - 3625951 | 14337.3 |
| hypothetical protein | SAMN04487898_1101 | Not Available | Positive | 3626022 - 3628751 | 93825.6 |
| conserved repeat domain-containing protein | SAMN04487898_1102 | Not Available | Positive | 3628865 - 3630502 | 56571.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

