Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporadically distributed protein, tigr04141 family | SAMN04487898_109210 | Not Available | Negative | 3599749 - 3601530 | 69393.9 |
| Trna-lys | Not Available | Not Available | Positive | 3601757 - 3601832 | Not Available |
| signal transduction histidine kinase | SAMN04487898_109212 | Not Available | Positive | 3602041 - 3603339 | 48230.2 |
| glucose uptake protein | SAMN04487898_109213 | Not Available | Negative | 3603418 - 3604422 | 35715.3 |
| ribokinase | SAMN04487898_109214 | Not Available | Negative | 3604446 - 3605345 | 31138.3 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_109215 | Not Available | Negative | 3605412 - 3608675 | 121513.0 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN04487898_109216 | Not Available | Negative | 3608679 - 3611831 | 118887.0 |
| hypothetical protein | SAMN04487898_109217 | Not Available | Negative | 3611840 - 3614074 | 80940.5 |
| starch-binding associating with outer membrane | SAMN04487898_109218 | Not Available | Negative | 3614114 - 3615847 | 65759.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_109219 | Not Available | Negative | 3615860 - 3619222 | 125317.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

