Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted neuraminidase (sialidase) | SAMN04487898_101259 | Not Available | Positive | 372612 - 373703 | 39881.7 |
| acetyl xylan esterase (axe1) | SAMN04487898_101260 | Not Available | Positive | 373708 - 375111 | 52427.4 |
| sugar phosphate isomerase/epimerase | SAMN04487898_101261 | Not Available | Positive | 375116 - 376012 | 33092.4 |
| protein of unknown function | SAMN04487898_101262 | Not Available | Positive | 376019 - 378562 | 94443.0 |
| predicted dehydrogenase | SAMN04487898_101263 | Not Available | Positive | 378572 - 379657 | 40948.6 |
| solute:na+ symporter, sss family | SAMN04487898_101264 | Not Available | Positive | 379697 - 381283 | 58287.9 |
| alpha-l-rhamnosidase | SAMN04487898_101265 | Not Available | Positive | 381299 - 383491 | 83359.0 |
| hypothetical protein | SAMN04487898_101266 | Not Available | Negative | 383577 - 384539 | 35917.5 |
| hypothetical protein | SAMN04487898_101267 | Not Available | Negative | 384647 - 385276 | 22336.5 |
| hypothetical protein | SAMN04487898_101268 | Not Available | Negative | 385326 - 386294 | 35813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

