Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_105164 | Not Available | Positive | 2261120 - 2261503 | 14171.0 |
| 1_nc_021795: hypothetical protein | SAMN04487898_105165 | Not Available | Positive | 2261524 - 2261814 | 11375.0 |
| Tail tape measure protein | SAMN04487898_105166 | Not Available | Positive | 2261874 - 2264354 | 85694.6 |
| Hypothetical protein | SAMN04487898_105167 | Not Available | Positive | 2264354 - 2266321 | 74725.0 |
| Putative endolysin/autolysin | SAMN04487898_105168 | Not Available | Positive | 2266337 - 2266780 | 16575.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 44 | 18.01 |
| hypothetical protein | SAMN04487898_1011 | Not Available | Negative | 1 - 134 | 5366.33 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 210 - 321 | 18.01 |
| hepn domain-containing protein | SAMN04487898_1012 | Not Available | Negative | 176 - 1069 | 34029.8 |
| dna-binding transcriptional regulator, xre family | SAMN04487898_1013 | Not Available | Positive | 1503 - 1715 | 7759.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

