Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_109190 | Not Available | Negative | 3583746 - 3584201 | 17765.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487898_109191 | Not Available | Negative | 3584376 - 3584903 | 20156.1 |
| hypothetical protein | SAMN04487898_109192 | Not Available | Positive | 3585029 - 3585451 | 16037.2 |
| hypothetical protein | SAMN04487898_109193 | Not Available | Negative | 3585454 - 3586149 | 26013.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN04487898_109194 | Not Available | Negative | 3586166 - 3587548 | 49740.3 |
| alcohol dehydrogenase, propanol-preferring | SAMN04487898_109195 | Not Available | Negative | 3587670 - 3588704 | 36572.4 |
| hypothetical protein | SAMN04487898_109196 | Not Available | Negative | 3588729 - 3590111 | 50963.9 |
| polyisoprenoid-binding protein ycei | SAMN04487898_109197 | Not Available | Negative | 3590141 - 3590767 | 22847.0 |
| broad specificity phosphatase phoe | SAMN04487898_109198 | Not Available | Positive | 3591321 - 3591875 | 21743.7 |
| swim zinc finger | SAMN04487898_109199 | Not Available | Negative | 3591935 - 3592402 | 17598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

