Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_109160 | Not Available | Positive | 3546916 - 3547266 | 13504.3 |
| mobilisation protein (mobc) | SAMN04487898_109161 | Not Available | Positive | 3547505 - 3547918 | 15064.5 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04487898_109162 | Not Available | Positive | 3547902 - 3548879 | 37220.9 |
| hypothetical protein | SAMN04487898_109163 | Not Available | Positive | 3548922 - 3549344 | 16348.0 |
| helicase conserved c-terminal domain-containing protein | SAMN04487898_109164 | Not Available | Negative | 3549409 - 3552825 | 131489.0 |
| hepn domain-containing protein | SAMN04487898_109165 | Not Available | Negative | 3552815 - 3554311 | 58056.0 |
| helix-turn-helix domain-containing protein | SAMN04487898_109166 | Not Available | Positive | 3554497 - 3554925 | 16245.3 |
| hypothetical protein | SAMN04487898_109167 | Not Available | Negative | 3555155 - 3556183 | 39271.2 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN04487898_109168 | Not Available | Negative | 3556512 - 3557216 | 27001.6 |
| hypothetical protein | SAMN04487898_109169 | Not Available | Negative | 3557174 - 3557677 | 20160.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

