Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choloylglycine hydrolase | SAMN04487898_109150 | Not Available | Positive | 3538604 - 3539665 | 39226.8 |
| porin | SAMN04487898_109151 | Not Available | Positive | 3539758 - 3540942 | 43587.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_109152 | Not Available | Positive | 3540968 - 3541516 | 20489.0 |
| putative carbohydrate metabolism domain-containing protein | SAMN04487898_109153 | Not Available | Positive | 3541551 - 3542696 | 42147.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_109154 | Not Available | Positive | 3542693 - 3543469 | 29217.1 |
| imidazolonepropionase | SAMN04487898_109155 | Not Available | Positive | 3543529 - 3544860 | 49018.6 |
| hypothetical protein | SAMN04487898_109156 | Not Available | Positive | 3544863 - 3545012 | 5787.4 |
| hypothetical protein | SAMN04487898_109157 | Not Available | Positive | 3545072 - 3546082 | 39152.9 |
| transcriptional regulator, alpa family | SAMN04487898_109158 | Not Available | Positive | 3546172 - 3546513 | 12743.2 |
| helix-turn-helix domain-containing protein | SAMN04487898_109159 | Not Available | Positive | 3546659 - 3546919 | 9970.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

