Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_109130 | Not Available | Negative | 3511450 - 3511935 | 18236.5 |
| hypothetical protein | SAMN04487898_109131 | Not Available | Negative | 3511932 - 3512252 | 11848.3 |
| hypothetical protein | SAMN04487898_109132 | Not Available | Positive | 3512483 - 3514345 | 71016.0 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487898_109133 | Not Available | Negative | 3514501 - 3515064 | 21914.4 |
| pectate lyase superfamily protein | SAMN04487898_109134 | Not Available | Negative | 3515082 - 3516851 | 65748.1 |
| lysophospholipase l1 | SAMN04487898_109135 | Not Available | Negative | 3516900 - 3517529 | 23525.0 |
| right handed beta helix region | SAMN04487898_109136 | Not Available | Negative | 3517555 - 3519405 | 69583.9 |
| suse outer membrane protein | SAMN04487898_109137 | Not Available | Negative | 3519429 - 3520601 | 43969.2 |
| major paralogous domain-containing protein | SAMN04487898_109138 | Not Available | Negative | 3520627 - 3521712 | 40488.3 |
| starch-binding associating with outer membrane | SAMN04487898_109139 | Not Available | Negative | 3521742 - 3523340 | 60719.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

