Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_109110 | Not Available | Negative | 3497622 - 3498866 | 46604.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_109111 | Not Available | Negative | 3498971 - 3499561 | 22888.8 |
| Trna-lys | Not Available | Not Available | Positive | 3499758 - 3499833 | Not Available |
| disulphide bond corrector protein dsbc | SAMN04487898_109113 | Not Available | Positive | 3500040 - 3500486 | 16685.5 |
| prc-barrel domain-containing protein | SAMN04487898_109114 | Not Available | Negative | 3500501 - 3501193 | 26157.0 |
| hypothetical protein | SAMN04487898_109115 | Not Available | Positive | 3501260 - 3501433 | 6392.14 |
| hypothetical protein | SAMN04487898_109116 | Not Available | Negative | 3501423 - 3501680 | 9270.31 |
| hypothetical protein | SAMN04487898_109117 | Not Available | Positive | 3501793 - 3501993 | 7364.89 |
| hypothetical protein | SAMN04487898_109118 | Not Available | Negative | 3502048 - 3502371 | 12029.4 |
| hypothetical protein | SAMN04487898_109119 | Not Available | Positive | 3502515 - 3503009 | 18810.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

