Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_101249 | Not Available | Positive | 353562 - 354500 | 36283.7 |
| hypothetical protein | SAMN04487898_101250 | Not Available | Positive | 354877 - 356532 | 60739.4 |
| hypothetical protein | SAMN04487898_101251 | Not Available | Positive | 356537 - 358162 | 58420.0 |
| hypothetical protein | SAMN04487898_101252 | Not Available | Positive | 358194 - 361370 | 117488.0 |
| putative collagen-binding domain of a collagenase | SAMN04487898_101253 | Not Available | Positive | 361383 - 362789 | 53086.6 |
| glycosyl hydrolases family 43 | SAMN04487898_101254 | Not Available | Positive | 362801 - 363709 | 34564.6 |
| bnr repeat-like domain-containing protein | SAMN04487898_101255 | Not Available | Positive | 363715 - 365559 | 69119.3 |
| sialate o-acetylesterase | SAMN04487898_101256 | Not Available | Positive | 365571 - 367010 | 53426.8 |
| beta-galactosidase/beta-glucuronidase | SAMN04487898_101257 | Not Available | Positive | 367027 - 369783 | 104365.0 |
| alpha-l-rhamnosidase | SAMN04487898_101258 | Not Available | Positive | 369816 - 372557 | 102469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

