Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_109100 | Not Available | Negative | 3479088 - 3480149 | 40866.3 |
| hypothetical protein | SAMN04487898_109101 | Not Available | Positive | 3480241 - 3480549 | 11448.5 |
| hypothetical protein | SAMN04487898_109102 | Not Available | Positive | 3480570 - 3481274 | 27369.4 |
| glucose uptake protein | SAMN04487898_109103 | Not Available | Negative | 3481572 - 3482576 | 35726.4 |
| ribokinase | SAMN04487898_109104 | Not Available | Negative | 3482648 - 3483559 | 31459.0 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_109105 | Not Available | Negative | 3483617 - 3486880 | 121577.0 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN04487898_109106 | Not Available | Negative | 3486884 - 3490036 | 118694.0 |
| hypothetical protein | SAMN04487898_109107 | Not Available | Negative | 3490045 - 3492279 | 80808.4 |
| starch-binding associating with outer membrane | SAMN04487898_109108 | Not Available | Negative | 3492318 - 3494051 | 65960.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_109109 | Not Available | Negative | 3494064 - 3497426 | 125388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

