Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like ligand binding domain-containing protein | SAMN04487898_10990 | Not Available | Positive | 3470426 - 3471214 | 30719.0 |
| arac-type dna-binding protein | SAMN04487898_10991 | Not Available | Negative | 3471223 - 3472188 | 37564.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04487898_10992 | Not Available | Positive | 3472276 - 3473448 | 43465.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_10993 | Not Available | Positive | 3473732 - 3474319 | 22715.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487898_10994 | Not Available | Positive | 3474374 - 3475057 | 25463.9 |
| hypothetical protein | SAMN04487898_10995 | Not Available | Negative | 3475050 - 3475307 | 10255.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487898_10996 | Not Available | Negative | 3475435 - 3475845 | 15586.6 |
| hepn domain-containing protein | SAMN04487898_10997 | Not Available | Positive | 3475975 - 3476874 | 34301.1 |
| fic family protein | SAMN04487898_10998 | Not Available | Negative | 3477160 - 3478296 | 43452.4 |
| hypothetical protein | SAMN04487898_10999 | Not Available | Negative | 3478606 - 3479061 | 17522.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

