Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 43 | SAMN04487898_10970 | Not Available | Negative | 3440748 - 3441755 | 37502.5 |
| protein of unknown function | SAMN04487898_10971 | Not Available | Negative | 3441749 - 3442756 | 39334.9 |
| starch-binding associating with outer membrane | SAMN04487898_10972 | Not Available | Negative | 3442776 - 3444854 | 78280.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10973 | Not Available | Negative | 3444865 - 3447912 | 113643.0 |
| ipt/tig domain-containing protein | SAMN04487898_10974 | Not Available | Negative | 3447967 - 3449373 | 52787.3 |
| hypothetical protein | SAMN04487898_10975 | Not Available | Negative | 3449576 - 3450661 | 40862.7 |
| aldose 1-epimerase | SAMN04487898_10976 | Not Available | Negative | 3450922 - 3452073 | 41970.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_10977 | Not Available | Negative | 3452077 - 3453306 | 45932.9 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04487898_10978 | Not Available | Negative | 3453334 - 3454467 | 42352.5 |
| beta-xylosidase, gh43 family | SAMN04487898_10979 | Not Available | Negative | 3454474 - 3456045 | 57428.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

