Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, bcr/cfla subfamily | SAMN04487898_10960 | Not Available | Negative | 3431101 - 3432309 | 43820.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04487898_10961 | Not Available | Negative | 3432337 - 3433209 | 33354.6 |
| trna (cmo5u34)-methyltransferase | SAMN04487898_10962 | Not Available | Positive | 3433305 - 3434027 | 27121.2 |
| hypothetical protein | SAMN04487898_10963 | Not Available | Positive | 3434066 - 3434410 | 13439.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487898_10964 | Not Available | Positive | 3434417 - 3434962 | 21004.5 |
| two component transcriptional regulator, lyttr family | SAMN04487898_10965 | Not Available | Negative | 3434949 - 3435683 | 27773.5 |
| ghkl domain-containing protein | SAMN04487898_10966 | Not Available | Negative | 3435680 - 3436744 | 41028.5 |
| hypothetical protein | SAMN04487898_10967 | Not Available | Positive | 3436969 - 3437970 | 37522.2 |
| hypothetical protein | SAMN04487898_10968 | Not Available | Positive | 3437992 - 3438216 | 8404.28 |
| protein of unknown function | SAMN04487898_10969 | Not Available | Negative | 3438264 - 3440711 | 90882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

