Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04487898_10950 | Not Available | Positive | 3423996 - 3424838 | 31373.2 |
| l,d-transpeptidase catalytic domain | SAMN04487898_10951 | Not Available | Negative | 3424891 - 3425694 | 29301.0 |
| selenocysteine lyase/cysteine desulfurase | SAMN04487898_10952 | Not Available | Negative | 3425887 - 3426963 | 40880.1 |
| ubie/coq5 methyltransferase family protein | SAMN04487898_10953 | Not Available | Positive | 3427062 - 3427910 | 31025.6 |
| regulatory protein, luxr family | SAMN04487898_10954 | Not Available | Negative | 3427913 - 3428665 | 28584.3 |
| hypothetical protein | SAMN04487898_10955 | Not Available | Positive | 3428797 - 3429144 | 13575.1 |
| protein of unknown function | SAMN04487898_10956 | Not Available | Negative | 3429240 - 3429806 | 21670.5 |
| doxx-like family protein | SAMN04487898_10957 | Not Available | Negative | 3429820 - 3430203 | 14476.3 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04487898_10958 | Not Available | Negative | 3430210 - 3430677 | 18150.8 |
| dna-binding transcriptional regulator, arsr family | SAMN04487898_10959 | Not Available | Negative | 3430684 - 3431007 | 12412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

