Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10939 | Not Available | Negative | 3415811 - 3415864 | 1860.38 |
| transaldolase | SAMN04487898_10941 | Not Available | Positive | 3416101 - 3416760 | 23187.2 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | SAMN04487898_10942 | Not Available | Negative | 3416838 - 3417368 | 19515.5 |
| phosphonoacetate hydrolase | SAMN04487898_10943 | Not Available | Negative | 3417406 - 3417981 | 21282.5 |
| hypothetical protein | SAMN04487898_10944 | Not Available | Positive | 3417985 - 3418137 | 6057.86 |
| signal transduction histidine kinase | SAMN04487898_10945 | Not Available | Negative | 3418079 - 3419332 | 47257.2 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN04487898_10946 | Not Available | Positive | 3419757 - 3421052 | 46769.3 |
| hypothetical protein | SAMN04487898_10947 | Not Available | Negative | 3421105 - 3421425 | 12157.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_10948 | Not Available | Negative | 3421483 - 3422562 | 39546.0 |
| sam-dependent methyltransferase, mida family | SAMN04487898_10949 | Not Available | Positive | 3422770 - 3423879 | 41761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

