Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unsaturated rhamnogalacturonyl hydrolase | SAMN04487898_10919 | Not Available | Positive | 3393533 - 3394336 | 29669.5 |
| pyruvate carboxylase | SAMN04487898_10920 | Not Available | Negative | 3394356 - 3397850 | 131202.0 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN04487898_10921 | Not Available | Negative | 3397935 - 3399122 | 43062.4 |
| isopentenyl-diphosphate delta-isomerase | SAMN04487898_10922 | Not Available | Negative | 3399140 - 3399667 | 20468.3 |
| protein of unknown function | SAMN04487898_10923 | Not Available | Negative | 3399708 - 3400091 | 14394.6 |
| hypothetical protein | SAMN04487898_10924 | Not Available | Negative | 3400069 - 3400866 | 29830.7 |
| uncharacterized conserved protein yeao, duf488 family | SAMN04487898_10925 | Not Available | Positive | 3400990 - 3401340 | 13986.0 |
| elongation factor p | SAMN04487898_10926 | Not Available | Positive | 3401581 - 3402141 | 20686.8 |
| doxx protein | SAMN04487898_10927 | Not Available | Negative | 3402196 - 3402573 | 13810.1 |
| hypothetical protein | SAMN04487898_10928 | Not Available | Negative | 3402518 - 3402667 | 5914.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

