Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, tim barrel domain | SAMN04487898_101239 | Not Available | Positive | 331197 - 334736 | 133436.0 |
| arac-type dna-binding protein | SAMN04487898_101240 | Not Available | Negative | 334748 - 335620 | 33762.8 |
| protein of unknown function | SAMN04487898_101241 | Not Available | Positive | 336039 - 336719 | 25601.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101242 | Not Available | Positive | 336767 - 339955 | 116327.0 |
| starch-binding associating with outer membrane | SAMN04487898_101243 | Not Available | Positive | 339967 - 341799 | 67440.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101244 | Not Available | Positive | 342127 - 345267 | 115727.0 |
| starch-binding associating with outer membrane | SAMN04487898_101245 | Not Available | Positive | 345294 - 347138 | 68820.5 |
| hypothetical protein | SAMN04487898_101246 | Not Available | Positive | 347169 - 348119 | 35137.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101247 | Not Available | Positive | 348488 - 351574 | 112555.0 |
| starch-binding associating with outer membrane | SAMN04487898_101248 | Not Available | Positive | 351587 - 353368 | 65957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

