Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_108222 | Not Available | Negative | 3349631 - 3351391 | 65698.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_108223 | Not Available | Negative | 3351413 - 3354463 | 112129.0 |
| starch-binding associating with outer membrane | SAMN04487898_108224 | Not Available | Negative | 3354506 - 3356413 | 71988.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_108225 | Not Available | Negative | 3356425 - 3359622 | 118960.0 |
| endo-1,4-beta-xylanase | SAMN04487898_108226 | Not Available | Negative | 3359939 - 3361066 | 43476.6 |
| beta-xylosidase | SAMN04487898_108227 | Not Available | Negative | 3361172 - 3362752 | 58469.4 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04487898_108228 | Not Available | Negative | 3362792 - 3364729 | 72017.3 |
| hypothetical protein | SAMN04487898_108229 | Not Available | Negative | 3364769 - 3367189 | 91658.3 |
| enterochelin esterase | SAMN04487898_108230 | Not Available | Negative | 3367211 - 3369154 | 72079.8 |
| carbohydrate binding module (family 6) | SAMN04487898_108231 | Not Available | Negative | 3369201 - 3370571 | 50527.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

