Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04487898_108212 | Not Available | Positive | 3337374 - 3337898 | 19696.2 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04487898_108213 | Not Available | Negative | 3337952 - 3338671 | 26766.7 |
| helix-turn-helix domain-containing protein | SAMN04487898_108214 | Not Available | Positive | 3338687 - 3339484 | 30735.8 |
| hypothetical protein | SAMN04487898_108215 | Not Available | Positive | 3339552 - 3340037 | 18035.1 |
| hypothetical protein | SAMN04487898_108216 | Not Available | Negative | 3339995 - 3342382 | 89765.9 |
| protein of unknown function | SAMN04487898_108217 | Not Available | Negative | 3342391 - 3343539 | 42832.3 |
| tonb-dependent receptor plug domain | SAMN04487898_108218 | Not Available | Negative | 3343536 - 3346043 | 93522.1 |
| hypothetical protein | SAMN04487898_108219 | Not Available | Negative | 3346048 - 3346788 | 27786.3 |
| carbohydrate binding domain-containing protein | SAMN04487898_108220 | Not Available | Negative | 3346918 - 3348606 | 61791.0 |
| protein of unknown function | SAMN04487898_108221 | Not Available | Negative | 3348631 - 3349605 | 35491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

