Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | SAMN04487898_108182 | Not Available | Negative | 3300987 - 3302342 | 49553.7 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04487898_108183 | Not Available | Negative | 3302342 - 3303457 | 39905.2 |
| cell division protein ftsw | SAMN04487898_108184 | Not Available | Negative | 3303468 - 3304634 | 42220.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04487898_108185 | Not Available | Negative | 3304637 - 3305980 | 49758.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04487898_108186 | Not Available | Negative | 3305980 - 3307230 | 46452.2 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04487898_108187 | Not Available | Negative | 3307230 - 3308684 | 53102.8 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04487898_108188 | Not Available | Negative | 3308686 - 3310788 | 77280.4 |
| hypothetical protein | SAMN04487898_108189 | Not Available | Negative | 3310772 - 3311203 | 16663.3 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04487898_108190 | Not Available | Negative | 3311200 - 3312105 | 33853.8 |
| mraz protein | SAMN04487898_108191 | Not Available | Negative | 3312095 - 3312568 | 17850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

