Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04487898_108172 | Not Available | Negative | 3289397 - 3289876 | 17668.3 |
| tyrosyl-trna synthetase | SAMN04487898_108173 | Not Available | Negative | 3289974 - 3291263 | 48059.5 |
| protein of unknown function, duf479 | SAMN04487898_108174 | Not Available | Positive | 3291418 - 3292047 | 24577.5 |
| dna ligase (nad+) | SAMN04487898_108175 | Not Available | Positive | 3292129 - 3294114 | 74594.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04487898_108176 | Not Available | Positive | 3294125 - 3295006 | 31677.9 |
| hypothetical protein | SAMN04487898_108177 | Not Available | Negative | 3295060 - 3295236 | 6511.83 |
| glycine c-acetyltransferase | SAMN04487898_108178 | Not Available | Negative | 3295495 - 3296736 | 46036.6 |
| cell division protein ftsz | SAMN04487898_108179 | Not Available | Negative | 3296904 - 3298538 | 59763.9 |
| cell division protein ftsa | SAMN04487898_108180 | Not Available | Negative | 3298668 - 3300029 | 49542.1 |
| cell division protein ftsq | SAMN04487898_108181 | Not Available | Negative | 3300032 - 3300994 | 35789.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

