Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_108162 | Not Available | Positive | 3271682 - 3272674 | 34839.4 |
| hypothetical protein | SAMN04487898_108163 | Not Available | Positive | 3272715 - 3274877 | 80866.5 |
| tetratricopeptide repeat-containing protein | SAMN04487898_108164 | Not Available | Positive | 3274865 - 3277594 | 103636.0 |
| 1,4-alpha-glucan branching enzyme | SAMN04487898_108165 | Not Available | Negative | 3277569 - 3279479 | 73414.0 |
| alpha-glucosidase | SAMN04487898_108166 | Not Available | Negative | 3279479 - 3281947 | 95786.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_108167 | Not Available | Negative | 3282115 - 3284979 | 103787.0 |
| penicillin amidase | SAMN04487898_108168 | Not Available | Positive | 3285144 - 3287582 | 91931.9 |
| hypothetical protein | SAMN04487898_108169 | Not Available | Positive | 3287587 - 3287937 | 12941.6 |
| acyl-protein synthetase, luxe | SAMN04487898_108170 | Not Available | Positive | 3287965 - 3288948 | 36836.1 |
| res domain-containing protein | SAMN04487898_108171 | Not Available | Negative | 3288945 - 3289397 | 16980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

