Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_108152 | Not Available | Positive | 3262109 - 3262357 | 9272.56 |
| 8-oxo-dgtp diphosphatase | SAMN04487898_108153 | Not Available | Negative | 3262335 - 3263024 | 27062.8 |
| 6-phosphofructokinase | SAMN04487898_108154 | Not Available | Positive | 3263315 - 3264301 | 35445.7 |
| hypothetical protein | SAMN04487898_108155 | Not Available | Positive | 3264303 - 3265145 | 31573.2 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04487898_108156 | Not Available | Positive | 3265150 - 3266151 | 35787.7 |
| hypothetical protein | SAMN04487898_108157 | Not Available | Positive | 3266405 - 3267205 | 30074.7 |
| peptidyl-dipeptidase dcp | SAMN04487898_108158 | Not Available | Positive | 3267287 - 3269431 | 80340.9 |
| hypothetical protein | SAMN04487898_108159 | Not Available | Negative | 3269491 - 3270144 | 25222.7 |
| tetratricopeptide repeat-containing protein | SAMN04487898_108160 | Not Available | Negative | 3270195 - 3270935 | 28222.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_108161 | Not Available | Negative | 3270935 - 3271504 | 21883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

