Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMN04487898_108142 | Not Available | Positive | 3252590 - 3253510 | 34898.5 |
| hypothetical protein | SAMN04487898_108143 | Not Available | Negative | 3253520 - 3253792 | 10375.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_108144 | Not Available | Negative | 3253904 - 3254491 | 20823.0 |
| signal transduction histidine kinase | SAMN04487898_108145 | Not Available | Positive | 3254635 - 3256401 | 67653.1 |
| hypothetical protein | SAMN04487898_108146 | Not Available | Negative | 3256418 - 3256717 | 11214.3 |
| tetratricopeptide repeat-containing protein | SAMN04487898_108147 | Not Available | Positive | 3256829 - 3257773 | 35856.7 |
| riboflavin synthase alpha chain | SAMN04487898_108148 | Not Available | Negative | 3257774 - 3258358 | 21536.6 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04487898_108149 | Not Available | Negative | 3258369 - 3259853 | 54930.9 |
| l-threonine aldolase | SAMN04487898_108150 | Not Available | Negative | 3259867 - 3260907 | 37360.3 |
| badf-type atpase | SAMN04487898_108151 | Not Available | Positive | 3261226 - 3262083 | 32132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

