Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | SAMN04487898_108122 | Not Available | Positive | 3233851 - 3234135 | 10787.0 |
| protein of unknown function | SAMN04487898_108123 | Not Available | Positive | 3234077 - 3234883 | 31342.5 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN04487898_108124 | Not Available | Positive | 3234895 - 3236331 | 55792.4 |
| hypothetical protein | SAMN04487898_108125 | Not Available | Positive | 3236331 - 3236948 | 24067.4 |
| hypothetical protein | SAMN04487898_108126 | Not Available | Positive | 3236945 - 3237280 | 13387.2 |
| hypothetical protein | SAMN04487898_108127 | Not Available | Negative | 3237434 - 3237949 | 17564.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_108128 | Not Available | Negative | 3238098 - 3238724 | 21353.5 |
| abc-2 type transport system atp-binding protein | SAMN04487898_108129 | Not Available | Negative | 3238966 - 3239670 | 25980.0 |
| glycyl-trna synthetase | SAMN04487898_108130 | Not Available | Positive | 3239834 - 3241321 | 57769.7 |
| cysteine-rich secretory protein family protein | SAMN04487898_108131 | Not Available | Positive | 3241499 - 3242185 | 26164.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

