Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_108112 | Not Available | Negative | 3223030 - 3224007 | 38018.4 |
| molecular chaperone hsca | SAMN04487898_108113 | Not Available | Positive | 3224276 - 3226132 | 67915.4 |
| zinc dependent phospholipase c | SAMN04487898_108114 | Not Available | Positive | 3226172 - 3227035 | 33660.2 |
| membrane-associated protein | SAMN04487898_108115 | Not Available | Negative | 3227050 - 3227748 | 25848.3 |
| protein of unknown function | SAMN04487898_108116 | Not Available | Negative | 3227834 - 3228538 | 25094.6 |
| dna polymerase-3 subunit beta | SAMN04487898_108117 | Not Available | Negative | 3228559 - 3229644 | 39877.4 |
| gliding-associated putative abc transporter substrate-binding component gldg | SAMN04487898_108118 | Not Available | Negative | 3229719 - 3231392 | 62061.2 |
| abc-2 type transport system permease protein | SAMN04487898_108119 | Not Available | Negative | 3231386 - 3232114 | 27314.0 |
| hypothetical protein | SAMN04487898_108120 | Not Available | Negative | 3232154 - 3232672 | 18628.3 |
| hypothetical protein | SAMN04487898_108121 | Not Available | Negative | 3232726 - 3233364 | 23610.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

