Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein b | SAMN04487898_108102 | Not Available | Negative | 3214900 - 3215559 | 24540.2 |
| chondroitinase b | SAMN04487898_108103 | Not Available | Negative | 3215575 - 3216987 | 50542.2 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN04487898_108104 | Not Available | Positive | 3217071 - 3217562 | 18362.1 |
| protein of unknown function | SAMN04487898_108105 | Not Available | Positive | 3217581 - 3218096 | 19359.9 |
| hypothetical protein | SAMN04487898_108106 | Not Available | Negative | 3218080 - 3218511 | 15647.0 |
| gliding motility-associated protein gldc | SAMN04487898_108107 | Not Available | Negative | 3218511 - 3218846 | 12953.5 |
| hypothetical protein | SAMN04487898_108108 | Not Available | Negative | 3218846 - 3219121 | 10197.3 |
| atp-dependent rna helicase rhle | SAMN04487898_108109 | Not Available | Negative | 3219128 - 3220456 | 49487.2 |
| dihydroorotase | SAMN04487898_108110 | Not Available | Positive | 3220612 - 3221946 | 49505.2 |
| protein of unknown function | SAMN04487898_108111 | Not Available | Positive | 3221946 - 3223019 | 41927.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

