Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10892 | Not Available | Positive | 3204834 - 3205901 | 41011.0 |
| hypothetical protein | SAMN04487898_10893 | Not Available | Positive | 3205904 - 3206176 | 9797.95 |
| hypothetical protein | SAMN04487898_10894 | Not Available | Positive | 3206176 - 3206379 | 7782.09 |
| hypothetical protein | SAMN04487898_10895 | Not Available | Negative | 3206396 - 3206545 | 5673.05 |
| hypothetical protein | SAMN04487898_10896 | Not Available | Positive | 3206612 - 3206740 | 4624.99 |
| susd family protein | SAMN04487898_10897 | Not Available | Negative | 3206995 - 3208875 | 70319.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10898 | Not Available | Negative | 3208896 - 3212447 | 131742.0 |
| fecr family protein | SAMN04487898_10899 | Not Available | Negative | 3212607 - 3213767 | 43437.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_108100 | Not Available | Negative | 3213858 - 3214448 | 22987.1 |
| gamma-glutamyl cyclotransferase, aig2-like | SAMN04487898_108101 | Not Available | Negative | 3214564 - 3214899 | 12598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

