Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10872 | Not Available | Negative | 3188263 - 3188997 | 28329.8 |
| protein of unknown function | SAMN04487898_10873 | Not Available | Positive | 3189029 - 3189274 | 9287.29 |
| arac-type dna-binding protein | SAMN04487898_10874 | Not Available | Positive | 3189300 - 3190283 | 37518.9 |
| nadph:quinone reductase | SAMN04487898_10875 | Not Available | Positive | 3190386 - 3191315 | 32127.0 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04487898_10876 | Not Available | Positive | 3191339 - 3192256 | 33878.6 |
| n-ethylmaleimide reductase | SAMN04487898_10877 | Not Available | Positive | 3192327 - 3193406 | 39586.0 |
| probable oxidoreductase, llm family | SAMN04487898_10878 | Not Available | Positive | 3193461 - 3194480 | 36724.1 |
| protein of unknown function | SAMN04487898_10879 | Not Available | Positive | 3194470 - 3194739 | 10203.6 |
| phospholipase_d-nuclease n-terminal | SAMN04487898_10880 | Not Available | Negative | 3194808 - 3194996 | 7106.03 |
| hypothetical protein | SAMN04487898_10881 | Not Available | Negative | 3194997 - 3195416 | 15689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

