Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04487898_10862 | Not Available | Positive | 3180879 - 3181571 | 26235.9 |
| short c-terminal domain-containing protein | SAMN04487898_10863 | Not Available | Negative | 3181563 - 3181874 | 11597.7 |
| bro family, n-terminal domain | SAMN04487898_10864 | Not Available | Positive | 3182245 - 3182883 | 25194.0 |
| methyltransferase domain-containing protein | SAMN04487898_10865 | Not Available | Negative | 3182953 - 3183576 | 23320.2 |
| smi1 / knr4 family (sukh-1) | SAMN04487898_10866 | Not Available | Positive | 3183871 - 3184296 | 15866.9 |
| putative esterase | SAMN04487898_10867 | Not Available | Negative | 3184554 - 3185723 | 44859.9 |
| hypothetical protein | SAMN04487898_10868 | Not Available | Negative | 3186101 - 3186673 | 22622.3 |
| hypothetical protein | SAMN04487898_10869 | Not Available | Negative | 3186693 - 3187310 | 23026.8 |
| hypothetical protein | SAMN04487898_10870 | Not Available | Negative | 3187554 - 3187784 | 8788.46 |
| bro family, n-terminal domain | SAMN04487898_10871 | Not Available | Positive | 3187924 - 3188097 | 6671.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

