Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04487898_10852 | Not Available | Negative | 3167126 - 3167887 | 28262.5 |
| cytochrome c-type biogenesis protein ccmf | SAMN04487898_10853 | Not Available | Negative | 3167939 - 3170407 | 92982.8 |
| cytochrome c-type biogenesis protein ccme | SAMN04487898_10854 | Not Available | Negative | 3170413 - 3170865 | 17049.4 |
| glutamate dehydrogenase (nad(p)+) | SAMN04487898_10855 | Not Available | Negative | 3171130 - 3172551 | 51751.2 |
| hypothetical protein | SAMN04487898_10856 | Not Available | Negative | 3172701 - 3172919 | 8130.34 |
| heme exporter protein c | SAMN04487898_10857 | Not Available | Negative | 3172922 - 3173581 | 25040.7 |
| rnd family efflux transporter, mfp subunit | SAMN04487898_10858 | Not Available | Negative | 3173956 - 3175038 | 39323.3 |
| multidrug efflux pump subunit acrb | SAMN04487898_10859 | Not Available | Negative | 3175053 - 3178325 | 118775.0 |
| outer membrane protein tolc | SAMN04487898_10860 | Not Available | Negative | 3178338 - 3179711 | 51300.0 |
| histidine kinase | SAMN04487898_10861 | Not Available | Positive | 3179863 - 3180882 | 39783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

