Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division transport system atp-binding protein | SAMN04487898_10842 | Not Available | Positive | 3160585 - 3161268 | 25340.9 |
| molecular chaperone grpe | SAMN04487898_10843 | Not Available | Positive | 3161397 - 3162011 | 23129.3 |
| molecular chaperone dnaj | SAMN04487898_10844 | Not Available | Positive | 3162018 - 3163190 | 41933.7 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04487898_10845 | Not Available | Positive | 3163237 - 3164160 | 32768.7 |
| hypothetical protein | SAMN04487898_10846 | Not Available | Negative | 3164200 - 3164634 | 16449.4 |
| septum formation protein | SAMN04487898_10847 | Not Available | Negative | 3164753 - 3165322 | 20624.8 |
| hypothetical protein | SAMN04487898_10848 | Not Available | Negative | 3165425 - 3165838 | 15057.5 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04487898_10849 | Not Available | Negative | 3165957 - 3166484 | 19210.1 |
| fes assembly protein iscx | SAMN04487898_10850 | Not Available | Negative | 3166489 - 3166731 | 9800.32 |
| ferredoxin, 2fe-2s | SAMN04487898_10851 | Not Available | Negative | 3166754 - 3167086 | 12147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

