Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_101219 | Not Available | Negative | 300278 - 300664 | 14371.0 |
| signal transduction histidine kinase | SAMN04487898_101220 | Not Available | Negative | 300751 - 302559 | 68615.0 |
| phosphoglycerate dehydrogenase | SAMN04487898_101221 | Not Available | Negative | 302815 - 303765 | 35196.8 |
| protein of unknown function | SAMN04487898_101222 | Not Available | Positive | 303882 - 304853 | 35364.3 |
| arac-like ligand binding domain-containing protein | SAMN04487898_101223 | Not Available | Negative | 304977 - 305759 | 29696.1 |
| nad(p)h dehydrogenase (quinone) | SAMN04487898_101224 | Not Available | Positive | 305857 - 307065 | 42985.7 |
| heparan-sulfate lyase | SAMN04487898_101225 | Not Available | Negative | 307143 - 309122 | 75407.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_101226 | Not Available | Negative | 309141 - 310349 | 45748.4 |
| arylsulfatase a | SAMN04487898_101227 | Not Available | Positive | 310656 - 312296 | 63164.6 |
| arylsulfatase a | SAMN04487898_101228 | Not Available | Positive | 312306 - 313808 | 56729.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

