Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase | SAMN04487898_10832 | Not Available | Positive | 3147232 - 3147987 | 27081.8 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN04487898_10833 | Not Available | Positive | 3147984 - 3148574 | 22290.6 |
| wd domain-containing protein, g-beta repeat-containing protein | SAMN04487898_10834 | Not Available | Positive | 3148580 - 3149479 | 33644.2 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN04487898_10835 | Not Available | Negative | 3149469 - 3155357 | 221688.0 |
| sh3 domain-containing protein | SAMN04487898_10836 | Not Available | Negative | 3155466 - 3156254 | 29303.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_10837 | Not Available | Positive | 3156380 - 3156835 | 16595.8 |
| 4fe-4s dicluster domain-containing protein | SAMN04487898_10838 | Not Available | Negative | 3156915 - 3157265 | 12791.7 |
| acyl-coa reductase (luxc) | SAMN04487898_10839 | Not Available | Positive | 3157343 - 3158365 | 38551.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_10840 | Not Available | Positive | 3158397 - 3160331 | 69497.9 |
| hypothetical protein | SAMN04487898_10841 | Not Available | Positive | 3160379 - 3160582 | 7761.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

