Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_107224 | Not Available | Negative | 3114880 - 3115120 | 9436.76 |
| hypothetical protein | SAMN04487898_1081 | Not Available | Positive | 3115121 - 3115537 | 15509.9 |
| Trna-leu | Not Available | Not Available | Positive | 3115728 - 3115807 | Not Available |
| integral membrane protein | SAMN04487898_1085 | Not Available | Negative | 3115867 - 3116151 | 10877.8 |
| molecular chaperone hscb | SAMN04487898_1086 | Not Available | Negative | 3116238 - 3116774 | 20452.4 |
| regulator of sigma e protease | SAMN04487898_1087 | Not Available | Negative | 3116780 - 3118114 | 48956.6 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04487898_1088 | Not Available | Negative | 3118143 - 3119303 | 41923.8 |
| phenylacetate-coenzyme a ligase paak, adenylate-forming domain family | SAMN04487898_1089 | Not Available | Negative | 3119304 - 3120833 | 57062.4 |
| hypothetical protein | SAMN04487898_10810 | Not Available | Negative | 3120843 - 3121628 | 29844.8 |
| glycosyl transferase family 2 | SAMN04487898_10811 | Not Available | Negative | 3121625 - 3122593 | 37260.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

