Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04487898_107213 | Not Available | Positive | 3101485 - 3102498 | 38012.4 |
| hypothetical protein | SAMN04487898_107214 | Not Available | Positive | 3102502 - 3103284 | 29810.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_107215 | Not Available | Negative | 3103290 - 3104330 | 38911.8 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04487898_107216 | Not Available | Positive | 3104466 - 3105047 | 22698.3 |
| abc-2 type transport system atp-binding protein | SAMN04487898_107217 | Not Available | Positive | 3105129 - 3106058 | 34617.9 |
| abc-2 type transport system permease protein | SAMN04487898_107218 | Not Available | Positive | 3106064 - 3108355 | 84499.7 |
| fecr family protein | SAMN04487898_107219 | Not Available | Positive | 3108427 - 3109518 | 40065.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_107220 | Not Available | Positive | 3109635 - 3113348 | 138433.0 |
| susd family protein | SAMN04487898_107221 | Not Available | Positive | 3113359 - 3114765 | 52676.4 |
| hypothetical protein | SAMN04487898_107222 | Not Available | Negative | 3114675 - 3114887 | 7893.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

