Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_107193 | Not Available | Negative | 3082668 - 3083036 | 13609.9 |
| putative n6-adenine-specific dna methylase | SAMN04487898_107194 | Not Available | Positive | 3083109 - 3084296 | 44566.7 |
| toxin yoeb | SAMN04487898_107195 | Not Available | Negative | 3084301 - 3084546 | 9564.43 |
| hypothetical protein | SAMN04487898_107196 | Not Available | Negative | 3084552 - 3084845 | 11102.5 |
| uncharacterized protein | SAMN04487898_107197 | Not Available | Positive | 3084981 - 3085628 | 24384.2 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04487898_107198 | Not Available | Positive | 3085701 - 3086726 | 39394.7 |
| hypothetical protein | SAMN04487898_107199 | Not Available | Positive | 3086813 - 3087454 | 24033.9 |
| inorganic phosphate transporter, pit family | SAMN04487898_107200 | Not Available | Positive | 3087465 - 3088478 | 35801.6 |
| hypothetical protein | SAMN04487898_107201 | Not Available | Negative | 3088785 - 3089237 | 17336.5 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_107202 | Not Available | Negative | 3089638 - 3090468 | 32172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

