Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_107173 | Not Available | Positive | 3054717 - 3057212 | 92460.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_107174 | Not Available | Positive | 3057239 - 3059656 | 89026.8 |
| nudix domain-containing protein | SAMN04487898_107175 | Not Available | Positive | 3059690 - 3060244 | 20902.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04487898_107176 | Not Available | Positive | 3060268 - 3061020 | 28502.1 |
| two component transcriptional regulator, lyttr family | SAMN04487898_107177 | Not Available | Negative | 3061017 - 3061769 | 28589.0 |
| histidine kinase | SAMN04487898_107178 | Not Available | Negative | 3061766 - 3062800 | 39827.8 |
| hypothetical protein | SAMN04487898_107179 | Not Available | Positive | 3063043 - 3063216 | 6230.95 |
| predicted transcriptional regulator | SAMN04487898_107180 | Not Available | Positive | 3063485 - 3063862 | 14778.9 |
| tonb family c-terminal domain-containing protein | SAMN04487898_107181 | Not Available | Positive | 3063859 - 3065856 | 74568.6 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN04487898_107182 | Not Available | Negative | 3065938 - 3066708 | 27939.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

