Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | SAMN04487898_101209 | Not Available | Negative | 291193 - 291963 | 27934.1 |
| predicted oxidoreductase | SAMN04487898_101210 | Not Available | Negative | 292123 - 293106 | 36100.8 |
| ca2+:h+ antiporter | SAMN04487898_101211 | Not Available | Positive | 293289 - 294371 | 37929.2 |
| protein of unknown function | SAMN04487898_101212 | Not Available | Negative | 294382 - 294816 | 16013.1 |
| hypothetical protein | SAMN04487898_101213 | Not Available | Negative | 294934 - 296292 | 52913.2 |
| hemolysin iii | SAMN04487898_101214 | Not Available | Negative | 296448 - 297086 | 23746.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487898_101215 | Not Available | Positive | 297174 - 298559 | 50636.8 |
| hypothetical protein | SAMN04487898_101216 | Not Available | Negative | 298574 - 299008 | 16698.4 |
| pp_00216 | SAMN04487898_101217 | Not Available | Positive | 299084 - 299665 | Not Available |
| azurin | SAMN04487898_101218 | Not Available | Positive | 299730 - 300248 | 18608.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

