Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN04487898_107153 | Not Available | Negative | 3035883 - 3037229 | 52313.4 |
| moxr-like atpase | SAMN04487898_107154 | Not Available | Negative | 3037237 - 3038214 | 36048.9 |
| hypothetical protein | SAMN04487898_107155 | Not Available | Negative | 3038218 - 3039399 | 45404.1 |
| protein of unknown function | SAMN04487898_107156 | Not Available | Negative | 3039396 - 3040121 | 28385.1 |
| hypothetical protein | SAMN04487898_107157 | Not Available | Negative | 3040124 - 3041002 | 33096.2 |
| uncharacterized membrane protein spoiim, required for sporulation | SAMN04487898_107158 | Not Available | Negative | 3041004 - 3042008 | 37777.7 |
| hypothetical protein | SAMN04487898_107159 | Not Available | Negative | 3042066 - 3042476 | 16134.5 |
| hypothetical protein | SAMN04487898_107160 | Not Available | Positive | 3043138 - 3043584 | 17043.2 |
| uncharacterized membrane protein yckc, rdd family | SAMN04487898_107161 | Not Available | Positive | 3043724 - 3044467 | 27470.0 |
| lysophospholipase l1 | SAMN04487898_107162 | Not Available | Negative | 3044468 - 3045265 | 29586.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

