Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, fis family | SAMN04487898_107143 | Not Available | Positive | 3021011 - 3022243 | 46033.0 |
| lipopolysaccharide-assembly | SAMN04487898_107144 | Not Available | Positive | 3022245 - 3022742 | 18121.7 |
| hypothetical protein | SAMN04487898_107145 | Not Available | Positive | 3022776 - 3023891 | 42190.8 |
| preprotein translocase subunit secg | SAMN04487898_107146 | Not Available | Positive | 3023904 - 3024248 | 11589.3 |
| chaperonin groes | SAMN04487898_107147 | Not Available | Positive | 3024464 - 3024754 | 10188.2 |
| chaperonin groel | SAMN04487898_107148 | Not Available | Positive | 3024862 - 3026502 | 57757.6 |
| pkd domain-containing protein | SAMN04487898_107149 | Not Available | Positive | 3026637 - 3032660 | 215802.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_107150 | Not Available | Positive | 3032705 - 3033691 | 35862.0 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN04487898_107151 | Not Available | Positive | 3033724 - 3034380 | 24268.1 |
| l-serine dehydratase | SAMN04487898_107152 | Not Available | Positive | 3034437 - 3035864 | 51034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

