Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase apoenzyme | SAMN04487898_107133 | Not Available | Positive | 3004222 - 3005178 | 37224.6 |
| branched-chain amino acid aminotransferase | SAMN04487898_107134 | Not Available | Positive | 3005204 - 3006268 | 38875.4 |
| dipeptidyl-peptidase-4 | SAMN04487898_107135 | Not Available | Positive | 3006360 - 3008480 | 80712.4 |
| tetratricopeptide repeat-containing protein | SAMN04487898_107136 | Not Available | Positive | 3008627 - 3010192 | 60152.3 |
| tonb-dependent receptor | SAMN04487898_107137 | Not Available | Positive | 3010442 - 3013210 | 103667.0 |
| hypothetical protein | SAMN04487898_107138 | Not Available | Positive | 3013243 - 3014499 | 45353.6 |
| 3-phytase | SAMN04487898_107139 | Not Available | Positive | 3014561 - 3015634 | 39709.1 |
| hypothetical protein | SAMN04487898_107140 | Not Available | Negative | 3015673 - 3017463 | 67352.7 |
| hypothetical protein | SAMN04487898_107141 | Not Available | Negative | 3017514 - 3019334 | 68751.5 |
| pp_02440 | SAMN04487898_107142 | Not Available | Positive | 3019525 - 3020955 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

