Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | SAMN04487898_107113 | Not Available | Negative | 2983052 - 2984236 | 43189.9 |
| sporulation related domain-containing protein | SAMN04487898_107114 | Not Available | Negative | 2984229 - 2984684 | 17180.8 |
| preprotein translocase subunit seca | SAMN04487898_107115 | Not Available | Negative | 2984751 - 2988059 | 123942.0 |
| hypothetical protein | SAMN04487898_107116 | Not Available | Negative | 2988214 - 2988513 | 11254.7 |
| hypothetical protein | SAMN04487898_107117 | Not Available | Negative | 2988633 - 2989259 | 24204.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_107118 | Not Available | Negative | 2989246 - 2989749 | 19599.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04487898_107119 | Not Available | Positive | 2989846 - 2990742 | 33762.9 |
| conserved hypothetical integral membrane protein | SAMN04487898_107120 | Not Available | Positive | 2990817 - 2991761 | 33252.1 |
| hypothetical protein | SAMN04487898_107121 | Not Available | Negative | 2991889 - 2992188 | 11958.3 |
| hypothetical protein | SAMN04487898_107122 | Not Available | Negative | 2992303 - 2992707 | 15647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

